Biochemistry

1308 Submissions

[2] viXra:1308.0115 [pdf] submitted on 2013-08-21 20:26:52

The Role of Bioinformatics as Auxilliary Tools for Molecular Biology

Authors: Arli Aditya Parikesit
Comments: 7 Pages. Proceeding of World-Wide Indonesian Student Association Scientific Writing Olympic. Pp:23-29. (The Ianguage of this manuscript is in Indonesian)

Molecular Biology is an emerging science, which has an active role in supplementing the field of medicine, agriculture, and environment. The data gathered from the wet experiment was already submitted to on line database. Bioinformatics is a new science, based upon the combination between biology and computer science. It has sucessfully managing those on line database as a source of genome and proteome data. The available genome and proteome database are GenBank from United States, DDBJ from Japan, and EBI from European Union. Molecular biology experiment needs biochemical regent, and they are very expensive. A certain breakthrogh is necessary, to reduce the cost of wet laboratory experiment. Bioinformatics could help to reduce the cost. The task of Bioinformatician is to convert those online data, into a useful biomedics information. It has been applied for drug, vaccine, and PCR primer synthesis. Pharmaceutical industry has utilized bioinformatics tools extensively. Bioinformatics could help to reduce the wet experiment cost. However, bioinformatics could not replace wet experiment totally.
Category: Biochemistry

[1] viXra:1308.0114 [pdf] submitted on 2013-08-21 20:31:16

The Role of Bioinformatics in Protein-Protein Interaction Study

Authors: Arli Aditya Parikesit
Comments: 9 Pages. 2010. Sigma Journal of Science and Technology Vol: 13. No: 1.p:1-7 . University of Sanata Dharma Press, Yogyakarta, Indonesia (The language of this manuscript is in Indonesian)

Molecular Biology is advancing through the protein-protein interaction studies. Its wet experiment has generated a massive amount of data. Bioinformatics was set up for converting those data into useful information. Protein-protein interaction wet experiment was a long and expensive labors. Bioinformatics are here to remedy those labors. Online experimentations at protein-protein interaction database are possible. The available databases are InterPare, ClusPro, and PROTORP. InterPare is an open and public database server for protein interaction interface information. ClusPro is an algorithm for filtering docked protein conformations, and rank them. While PROTORP is a database to calculates a series of physical and chemical parameters of the protein interaction sites that contribute to the binding energy of the association. The online databases are useful tools for aiding the wet laboratory protein-protein interaction experiment.
Category: Biochemistry